FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429623
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59081.3751591511627637No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA29760.6927003442553122No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12410.2888579056521648No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11980.27884913051675536No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA10660.248124518473173No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6900.16060592659145342No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC6770.15758001782958547No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6580.15315753579300923No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6070.14128666295798875No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC5980.13919180304592632No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5860.13639865649650973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)