FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433785
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62591.4428806897426145No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA29760.6860541512500432No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12530.28885277268693016No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11910.27455997786922093No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA10520.24251645400371152No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7510.1731272404532199No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6860.1581428587894925No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6260.14431112186912873No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6220.1433890060744378No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6080.1401616007930196No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5510.12702145071867402No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)