FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416730
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA29570.7095721450339548No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18440.4424927411033523No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA12640.30331389628776423No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG11300.27115878386485254No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA11130.2670794039306026No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7080.16989417608523502No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6530.1566961821803086No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC6520.15645621865476447No Hit
CCGAAGAAAAACCGTAAACCGAAGCCACCGA6210.14901734936289684No Hit
ACCCTGTCCCTGTCTCAGCTGTACTCCCACA5770.13845895423895568No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5640.13533942840688215No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5590.13413961077916156No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA5500.13197993904926453No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC5250.12598085091066158No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5180.12430110623185275No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG5150.12358121565522041No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA4770.11446260168454395No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4770.11446260168454395No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT4740.1137427111079116No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG4720.11326278405682337No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG4380.10510402418832338No Hit

[OK]Adapter Content

Adapter graph