FastQCFastQC Report
Wed 31 May 2023
EGAF00007931854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468946
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5640.12026971122474656No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5610.11962997871823196No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5580.11899024621171733No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5220.11131345613354202No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG4730.10086449186047007No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4710.10043800352279367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)