FastQCFastQC Report
Wed 31 May 2023
EGAF00007931888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451620
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22700.5026349585935078No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7180.15898321597803464No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4940.10938399539435809No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4910.10871972011868385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)