FastQCFastQC Report
Sun 21 May 2023
EGAF00007931910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469922
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23370.4973165759423905No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18180.3868727150463268No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14580.31026425662131163No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7100.15108890411600223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)