FastQCFastQC Report
Sun 21 May 2023
EGAF00007931944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517896
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45400.8766238781531427No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9890.19096498138622425No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9170.17706257627013916No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8450.1631601711540541No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5980.11546719804748444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)