FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences395700
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43381.0962850644427595No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11740.29668941117007835No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7580.19155926206722265No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6120.15466262319939347No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4730.11953500126358353No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)