FastQCFastQC Report
Sun 21 May 2023
EGAF00007931962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438800
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23050.5252962625341842No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6830.1556517775752051No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5960.1358249772105743No Hit
CGTGGCGAACAGCAGTGGCTGGCAGGCAACC4930.11235186873290792No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG4510.1027803099361896No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4390.10004557885141294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)