FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007931984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456105
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48181.0563357121715393No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19920.436741539777025No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14940.3275561548327688No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7300.16005086548053626No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7130.15632365354468816No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6060.13286414312493833No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5940.13023316999375142No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5670.12431348044858093No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5500.12058626851273281No Hit
ATCGTCACCCCACCGTCCGCGCGTCCGCGTA5000.10962388046612075No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4670.10238870435535677No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)