FastQCFastQC Report
Sun 21 May 2023
EGAF00007931992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007931992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447620
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49981.1165720923998035No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11090.24775479201108083No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8690.19413788481301103No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7340.16397837451409678No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6560.14655287967472408No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6120.13672311335507795No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5840.13046780751530318No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5360.11974442607568919No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4710.10522318037621196No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4710.10522318037621196No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)