FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007932000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484807
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG51111.0542339528925944No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19450.40119057686873333No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14170.2922812583151646No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9550.19698560458079195No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9370.19327278690282937No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5910.12190418042643775No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5750.11860389804602657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)