FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487902
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT37520.7690068907280561No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25370.5199814716889868No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC15480.31727683018311054No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11720.24021217375620516No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8480.17380539534578665No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG8320.17052604826379067No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG8220.16847645633754318No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7290.14941525142344161No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC6920.1418317612963259No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6810.13957721017745367No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6760.13855241421432993No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT6720.13773257744383094No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6720.13773257744383094No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6460.13240363843558747No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT6340.12994412812409048No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC6210.12727965861996876No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5910.12113088284122632No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5530.11334243352148587No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5230.1071936577427434No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC4900.10043000438612672No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4890.10022504519350196No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)