FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454927
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22990.5053558043378388No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8130.1787099908336942No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7990.1756325740173698No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7930.17431368109608794No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT6020.13232892310194821No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5930.13035058372002542No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5920.1301307682331451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)