FastQCFastQC Report
Wed 31 May 2023
EGAF00007932016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496411
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA32590.6565124463398273No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25190.507442421702984No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA17350.34950877397962576No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA15310.30841379421487436No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12000.24173517508677286No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10270.20688502067842976No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8420.16961751451921894No Hit
ACTCTGGCTACCCCAGCCGTGCGTCGTCTGG6290.12670952094131677No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6050.12187481743958131No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5350.10777359889285289No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)