FastQCFastQC Report
Sun 21 May 2023
EGAF00007932018

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932018
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480162
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50511.0519366380513242No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA31390.6537376968606429No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA16630.34634144309628834No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA15180.3161433016356979No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11710.2438760251748368No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8790.18306321616454446No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG7830.16306996388718809No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6430.13391313764937665No Hit
ACTCTGGCTACCCCAGCCGTGCGTCGTCTGG5930.1234999854215869No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5240.10912983534723697No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)