FastQCFastQC Report
Wed 31 May 2023
EGAF00007932022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427336
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49261.1527229159256418No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8500.19890671509070146No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5950.13923470056349102No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4980.11653593425314038No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4890.11442986315218001No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4870.1139618473519666No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4460.10436752344759159No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4420.10343149184716477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)