FastQCFastQC Report
Wed 31 May 2023
EGAF00007932024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435983
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46601.0688490147551626No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8120.18624579398738023No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6560.1504645823346323No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4980.11422463719915683No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4790.10986666911324523No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4470.10252693338960463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)