FastQCFastQC Report
Sun 21 May 2023
EGAF00007932026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464697
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9800.21089010688685314No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8100.1743071291615827No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7870.16935766746934022No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7430.15988913205809377No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6050.13019236190463895No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4860.10458427749694962No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4650.10006520377794563No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)