FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007932064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences395246
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35800.9057650172297758No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13660.3456075456804117No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG7360.18621314320701537No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG7340.18570712923090937No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6150.15559929765260117No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG5740.14522601114242775No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5550.14041887836942057No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5380.1361177595725194No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4720.11941929836102073No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC3960.10019076726899197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)