FastQCFastQC Report
Sun 21 May 2023
EGAF00007932067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences373221
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG9340.25025387103083696No Hit
TGCTGGTTTCGCGGCCGGTTTTGCGGTCGGTTTCGCAGCCGGTT8830.23658904509660494No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG7820.20952733099155726No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG6090.16317409792053503No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG5580.14950927198630304No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA5520.14790164540580514No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5350.1433467034277278No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA5110.13691619710573627No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG5010.13423681947157315No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5000.13396888170815682No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG5000.13396888170815682No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG4920.13182537960082633No Hit
CGCGGACAGAGTCACGCCAGACGCCGGAGCCCAGTTGCCCAGTG4880.13075362854716108No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG4730.12673456209591635No Hit
ACCCAGGGTGATCTGCTGAACACGATCGGAGTAGCCGCACGCTT4590.12298343340808797No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG4510.12083993130075747No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG4480.12003611801050852No Hit
GGCTGCCGGTTTAGCCGCCGGCTTGGCCGCTGCGGACTTAGCAA4030.10797891865677439No Hit
GATGGTGGATTCGGAACGGCTACGACGCTGAACGACGTGGCGGG3970.10637129207627652No Hit
GTGCGGGTAGATCGGCAGGTTGCCCAGCAGAGTGCCGTCGAAGT3790.10154841233478287No Hit

[OK]Adapter Content

Adapter graph