FastQCFastQC Report
Sun 21 May 2023
EGAF00007932088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434595
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39270.9035999033582992No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16020.368619059124012No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14840.34146734315857297No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7350.16912297656438754No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5510.12678470760132998No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5440.12517401258643104No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4840.11136805531586881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)