FastQCFastQC Report
Wed 31 May 2023
EGAF00007932103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences295548
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8900.30113551775007785No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC8070.2730520930610256No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA8070.2730520930610256No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT6850.23177284231326217No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5990.20267435408123216No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT5680.1921853641371283No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC5010.16951561167729098No Hit
TGGCAGGTCCGGCTGCGGCGGCAGCATTGGACGCGCCGGGGCGG4730.16004168527616497No Hit
TTTCAGGATAGACGGGCTTGCAACCGGCGGAGCGTTGGATACAG4550.1539513040182982No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG4360.14752256824610555No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG4150.14041712344526103No Hit
AGGGTGGGTCTTCGGGGTCGGCCACGGCAGTTTACGCGGTTTTT4140.14007876893093507No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA4050.1370335783020017No Hit
AGACGCTAGATGAGGAGCGTACGGAGCTGAACACAGATTTAAAT3970.13432674218739427No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGGGGC3780.12789800641520158No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT3530.11943914355705333No Hit
ATACGGATAAGAACTACGGGCAGTGGCTGTAACCCTCTTAACCG3440.11639395292811996No Hit
CGGATGAGTTTTCGGAGTCGGCCACGGCAGTTTACGCGGCTTCT3170.10725838104131985No Hit
TGCGTCTTCGAAATCCTCGTCATCGTCATCTTCTTCTTCACGCA3020.10218306332643091No Hit
GTTGCGCGGCGGACGAGTACGTACCGGAACGCGCAGACCGCTCA2990.1011679997834531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)