FastQCFastQC Report
Sun 21 May 2023
EGAF00007932112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451488
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38850.8604879863916649No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15940.3530547877241477No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG6090.13488730597490964No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5330.11805407895669431No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4660.10321426040116237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)