FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007932131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483755
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10950.2263542495684799No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG10190.21064381763495985No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG9980.2063027772322767No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG8780.1814968320740871No Hit
GTACTCCGGTTTGGTCAGCTGCATGGTAATCGCTTCACGCTGCA8740.18066996723548076No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG7890.1630990894150965No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG7400.15296999514216908No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG7110.14697522506227326No Hit
ACCTGCGGAGGTAACGTTGTTGTTGGTTTTCGGAGCGGTGGTGT6710.13870657667621006No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG6490.1341588200638753No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG6040.12485659062955422No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5870.12134241506547737No Hit
GATGGTGGATTCGGAACGGCTACGACGCTGAACGACGTGGCGGG5380.11121332079254995No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)