FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442334
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63161.4278802895549516No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6620.14966066366139613No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6280.14197416431927004No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5850.1322530033865812No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4470.10105485899795177No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)