FastQCFastQC Report
Wed 31 May 2023
EGAF00007932144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477131
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67091.4061127866351169No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22420.46989191647576867No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG12950.2714139303461733No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC10800.22635293032731052No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8890.18632199542683248No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8840.18527406519383566No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8660.18150151635504713No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8530.17877689774925545No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7480.15677036285632248No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6620.13874596284877738No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5500.11527232562964888No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5340.1119189488840591No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5270.11045184655786357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)