FastQCFastQC Report
Wed 31 May 2023
EGAF00007932176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences489751
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30490.6225612607222853No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8970.1831542967753001No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5910.12067356677168602No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5720.11679404432048121No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4910.10025502755481867No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)