FastQCFastQC Report
Sun 21 May 2023
EGAF00007932180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472486
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT95032.011276524595438No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27980.5921868584465995No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18720.3962022155153804No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC14910.31556490562683337No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT10900.23069466608534434No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10050.21270471506034042No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9020.1909051273476886No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8890.18815372307327624No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8690.18392079342033416No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8460.17905292431945075No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7210.15259711398856263No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5300.11217263580296558No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT5030.10645818077149377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)