FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences432512
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT89162.0614456939923054No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60611.4013484018940516No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16140.37316883693400416No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC12990.30033848771825983No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9650.2231151968037881No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8270.19120856762355729No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7890.1824226842261024No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7880.18219147676827463No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7840.1812666469369636No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7580.17525525303344183No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7080.16369488014205388No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4700.10866750517904707No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)