FastQCFastQC Report
Sun 21 May 2023
EGAF00007932192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502836
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30040.5974114820736781No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG22330.44408117159471483No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG15620.3106380609184704No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG15290.30407528498357317No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12300.24461255757344344No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC11750.23367459768194798No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6580.1308577747018909No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG6490.12906792671964618No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)