FastQCFastQC Report
Wed 31 May 2023
EGAF00007932208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513707
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30950.6024835168685652No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14840.28888062650499213No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12190.2372948003433864No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9480.18454099321208395No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9410.18317834874743774No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9120.17753310739390352No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8910.17344517399996495No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8530.16604796119188564No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8200.1596240658585536No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8020.15612012294946342No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7940.15456281498986776No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6930.13490180199997276No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6660.12964588763633744No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG6480.12614194472724724No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6220.1210806938585614No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6180.12030203987876356No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6000.11679809696967339No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5530.10764891270704897No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5530.10764891270704897No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5390.10492362377775659No Hit

[OK]Adapter Content

Adapter graph