FastQCFastQC Report
Sun 21 May 2023
EGAF00007932222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461383
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT48691.0553054620564695No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28040.6077380397630603No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15180.3290108218118136No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10480.2271431760598028No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10370.22475903966986213No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10020.21717315115641453No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9250.2004841964268298No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA9080.19679962200601234No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7790.16884020434216257No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7700.16688954729584748No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6350.13762969160112098No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5890.12765966669773268No Hit
TCCTACACCAACGGCAAACTGACTATCACCC5390.11682268310709325No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)