FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465094
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG12630.2715580076285654No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG11910.25607726610104625No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT9270.1993145471668093No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT8010.17222324949365075No Hit
TACACCGACACGGGAACCGCGACCTTTAACCGGGGATGGCGGAG7240.15566745647116498No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC6250.13438143687082613No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT5310.11417046876545386No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC4950.10643009800169428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)