FastQCFastQC Report
Sun 21 May 2023
EGAF00007932246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482305
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48210.9995749577549475No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7430.15405189662143248No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6880.14264832419319726No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6570.13622085609728285No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA4950.1026321518541172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)