FastQCFastQC Report
Wed 31 May 2023
EGAF00007932248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488535
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48210.9868279652430225No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7600.15556715486096184No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6760.13837289037632924No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6640.13591656687852458No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5250.10746415302895392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)