FastQCFastQC Report
Wed 31 May 2023
EGAF00007932258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487579
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT50141.0283461756966563No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48991.004760254235724No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23380.4795120380492187No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14500.2973877053769748No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10520.21575990762522584No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9690.1987370251795094No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8440.1731001540263219No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5260.10787995381261292No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)