FastQCFastQC Report
Sun 21 May 2023
EGAF00007932262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences531410
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19590.3686419149056284No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13230.24896031312922226No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11210.21094823206187313No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG10650.2004102293897367No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG9980.1878022619070021No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC9090.17105436480307107No Hit
GATGGCGAACACCGTCGTCACCGTGCCCACC8040.15129560979281534No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6410.12062249487213263No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6160.11591802939350032No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5850.11008449219999623No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5370.10105191848102218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)