FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405817
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT12490.30777419378685467No Hit
AGCGGAAGAGCCGAACAGGCGACGGCTTGCACCTGGTTTGCGGG11030.2717973865067259No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5330.13133998822129186No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT4880.12025124625138918No Hit
GAACACTACAACTTTTTTGTTGCCGATCAGATAAATACCGGCCG4390.10817683832860625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)