FastQCFastQC Report
Wed 31 May 2023
EGAF00007932291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391890
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT12010.3064635484447166No Hit
AGCGGAAGAGCCGAACAGGCGACGGCTTGCACCTGGTTTGCGGG10570.2697185434688305No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT5380.1372834213682411No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5070.12937303835259895No Hit
GAACACTACAACTTTTTTGTTGCCGATCAGATAAATACCGGCCG4310.1099798412819924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)