FastQCFastQC Report
Wed 31 May 2023
EGAF00007932292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391890
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40831.0418739952537701No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11930.3044221592793896No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG10780.27507719002781394No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5380.1372834213682411No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5330.1360075531399117No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG4240.10819362576233126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)