FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007932296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441286
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11620.263321292767049No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7190.1629328825296973No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6080.13777912736864528No Hit
TTCGATGCACTGCCGAAAAAGAAATCCCGTA5850.13256708801094982No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5510.12486233417783477No Hit
CGTCGCCAGCGTGCAATCGACAAACGCCAGC4880.11058587854588635No Hit
TTCGACGCCCTGCCGAAGAAAAAATCTCGCA4840.10967943691846105No Hit

[OK]Adapter Content

Adapter graph