FastQCFastQC Report
Sun 21 May 2023
EGAF00007932300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences415867
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41681.002243505736209No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7490.18010565878033122No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC6990.16808258409539586No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4910.11806659340606492No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG4860.1168642859375714No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4680.11253597905099466No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4210.10123428884715546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)