FastQCFastQC Report
Wed 31 May 2023
EGAF00007932321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361741
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6610.18272742100010783No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG5330.1473429884917662No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG4310.11914601883668148No Hit
CAGAGACAGGGTGGAATCGGCGTAAATTGCGTCACGCTGTTTGC3990.11029991070959609No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA3950.10919414719371041No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG3670.1014538025825107No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA3660.10117736170353928No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)