FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007932322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361741
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36221.0012688636344789No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8780.2427150917369057No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6580.18189809836319357No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5890.16282367771416564No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5260.14540790233896628No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5000.1382204394857094No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG3960.10947058807268184No Hit
CACGCAGAACTGAAATCCCTGACCGGTGCGG3700.10228312521942495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)