FastQCFastQC Report
Sun 21 May 2023
EGAF00007932324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007932324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences366350
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36761.0034120376688958No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9540.2604067148901324No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6840.18670670124198172No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5890.16077521495837313No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5380.146854101269278No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4950.13511669168827625No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4350.11873891087757608No Hit
CACGCAGAACTGAAATCCCTGACCGGTGCGG3700.10099631499931759No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG3700.10099631499931759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)