FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTTCCATTCGATTCCATTTGATGATTCCATTCGATTCCATTCGACGA218.181818181818183No Hit
TTTGTATGTGCAGAGGCGTCACTCTCCACTAAGCCTTTCTCTCCCCTCCC218.181818181818183No Hit
GCGTTTCCCCTAGGGATGGGGCTTCCTGAGAGCCAAATTGCGGTGATTGT218.181818181818183No Hit
AATGTGTTTTATACGCGTCTGGCATTTCCCTTGCTTGCACTCACTTGGTC19.090909090909092No Hit
TTTGTATGTGCAGATGCTTCACTCTCCACTAAGCCTGTCTCTCCCAACCC19.090909090909092No Hit
GTCTTCTCTTTAAAATTGGGAGAGCCTGGAAGAAAAAGCTCTAGCTATGT19.090909090909092No Hit
ACAGTTAAATAATGATTTCAAATAATAGGTCAGAGGATATTATCTATTCC19.090909090909092No Hit
GAACTTATAACATTACACAATAGATTCAACCCATTTTCCATTGTCACCAA19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)