FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTAAAAAGATGACCCAGAATGGCCCGCTCTTCCATTCTGTGTTGGGA529.411764705882355No Hit
CCGTGAAATCAACTATAGTGGAATGGAATGGAATGGAATGGATTGGAATG317.647058823529413No Hit
GGGTTATGGGTCTAATATTAAAGTCATTCATCTGTATTGAGTTGACTTTT317.647058823529413No Hit
TTAGTAGTCAATGATTTATAGCAACAATCAAATCCTTGAGACGGTGGTTT15.88235294117647No Hit
GACTAAAACAACCCTAGCATGTGAGAAAGGGCAGGATTCCAACAAAGCTC15.88235294117647No Hit
ATACTAAAAAGATGACCCAGAATGGCCCGCTCTTCCATTCTGTTTAGGGA15.88235294117647No Hit
GGTGTACCTATTAAAGTACACTGTGATGTCAACAAATAGGTTTTCATTTT15.88235294117647No Hit
GGAGTACAAATATGTGAAAAAAAGCTCGTCATCAGCGGTCATTAGAGAAA15.88235294117647No Hit
CCGTTTTTACAGTTGGAAAATAAACGTGATGCTTTCTTTCCTCCATTACA15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)