FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTTCTGCCATCTAATCTGAGGGAATTTAGAAATGAATCACTGATTCCT218.181818181818183No Hit
AGACTAATAAATATAGATATTTGTGGAAATCCACTGATGCTTTTTATGTT218.181818181818183No Hit
ATAAAAATCAAAAAATAAAACACTCAAAATATATCACAAAAAAAATAAAA19.090909090909092No Hit
ATACTTCTCTCTCACTCTCACTCTCTCTCTCTCTCTCTCTAACTCTCTCA19.090909090909092No Hit
GTTGTCTTTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTCCATG19.090909090909092TruSeq Adapter, Index 18 (97% over 37bp)
CCGTCTGTACCCCAGAGATTAACAGAATTTCTACTGTTGTCTCTACACAT19.090909090909092No Hit
TAAGTTCAAGGTGGCCTCATCAACACTTATTTGGCTTCCCAGCTTTTGTA19.090909090909092No Hit
TCACTAGCTCCTTTTCCTACACAATATCCCATCTTTCTAAAGAAAAAAAG19.090909090909092No Hit
AGGTCACACATATAATATAGGTGCCCCTAAATATAGACTGTGGAAAATGC19.090909090909092No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)