FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTAGACACACACACTTTTGACGGAATACTGAAATGGGAGATCCATGC216.666666666666664No Hit
ATTCTCAAAAAGGTAGCTTGGAAAGTTTTAATTTAATGTAATAGGAAGCA216.666666666666664No Hit
CGTGTCCGCTTCCCCACTCACCTCATAGGATATTTACAAGGATTGAGGAA216.666666666666664No Hit
TTCTACTCTGTCACCCAATCTAGAGTGCAGTGGTGTGACCTCGGCTTACT216.666666666666664No Hit
TTAGTAAGTTCCTGTGCGGCAGGCCCAGCTTGCCTGCACCTTTGTGACTT18.333333333333332No Hit
ATTCTGTGACTGCAGGGTATTTCCCAGCGGGGGAGTGCCATGCTTTTCCT18.333333333333332No Hit
TTGTGAAAGGAGAAGAAAGGAAAGAACACCAGAGGGGTTGTGAAGATAGA18.333333333333332No Hit
TCGTCGTAATGACTTTCACCCATATGGGAAGGAAGCTTATGAGTCTATCA18.333333333333332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)